How Alan Turing's Reaction-Diffusion Model Simulates Patterns in NaturenThanks to http://www.audible.com/minuteearth for sponsoring this vid...
How Alan Turing's Reaction-Diffusion Model Simulates Patterns in NaturenThanks to http://www.audible.com/minuteearth for sponsoring this video.nAsparagus Pee Survey Results: https://goo.gl/8x7abLnn___________________________________________nnIf you liked this video, we think you might also like this: nnReaction Diffusion Simulation (Gray-Scott model) nhttps://pmneila.github.io/jsexp/grayscott/nn___________________________________________nnCredits (and Twitter handles):nScript Writer: Rachel Becker (@RA_Becks)nScript Editor: Emily Elert (@eelert)nVideo Illustrator: Ever Salazar (@eversalazar)nVideo Director: Emily Elert (@eelert)nVideo Narrator: Emily Elert (@eelert)nWith Contributions From: Henry Reich, Alex Reich, Kate Yoshida, Omkar Bhagat, Peter Reich, David Goldenberg nMusic by: Nathaniel Schroeder: http://www.soundcloud.com/drschroedernnAlso, special thanks to the following scientists: nGreg Barsh: Investigator, HudsonAlpha Institute for Biotechnology (http://goo.gl/RMD8o9) nJeremy Green: Professor of developmental biology, King’s College London (https://goo.gl/Qcn8Ay)nThomas Hiscock: Graduate student in systems biology, Harvard University (http://goo.gl/RbAWIy)nShigeru Kondo: Professor, Osaka University (http://goo.gl/uQ2wYO)nJames Sharpe: Coordinator of EMBL-CRG Systems Biology Unit and ICREA research professor (http://goo.gl/QCGul8)nIan Stewart: Emeritus professor of mathematics, University of Warwick and author of The Mathematics of Life (http://goo.gl/rGR1R0)nThomas Woolley: Postdoctoral scientist, St John's College Oxford (http://goo.gl/B4FZNn)nnImage Credits:n- Mouse palate images provided courtesy of Jeremy Green, King’s College London. n- Digit patterns image provided courtesy of Luciano Marcon and Jelena Raspopovic.n- Angelfish and zebrafish images provided courtesy of Shigeru Kondo.n_________________________________________nnSubscribe to MinuteEarth on YouTube: http://goo.gl/EpIDGdnSupport us on Patreon: https://goo.gl/ZVgLQZnFacebook: http://goo.gl/FpAvo6nTwitter: http://goo.gl/Y1aWVCnitunes: https://goo.gl/sfwS6nnn___________________________________________nnHere are some handy keywords to get your googling started: nnReaction-diffusion system: A hypothetical system in which multiple chemical substances diffuse through a defined space at different rates and react with one another, thereby generating a pattern. nnTuring pattern: A periodic pattern that forms in a space where the initial distribution of ‘activator’ and ‘inhibitor’ is the same.nnMorphogenesis: The processes during development that give rise to the form or shape of the organism or a structurennAlan Turing: Alan Turing was a British mathematician and the father of modern computer science. During World War II, he broke Germany’s Enigma code used to encrypt communications.nn____________________nnReferences:nnEconomou, A. D., Ohazama, A., Porntaveetus, T., Sharpe, P. T., Kondo, S., Basson, M. A., … Green, J. B. A. (2012). Periodic stripe formation by a Turing-mechanism operating at growth zones in the mammalian palate. Nature Genetics, 44(3), 348–351. http://doi.org/10.1038/ng.1090nnEconomou, A. D., & Green, J. B. (2014). Modelling from the experimental developmental biologists viewpoint. Seminars in Cell & Developmental Biology, 35, 58-65. doi:10.1016/j.semcdb.2014.07.006nnGreen, J. B., & Sharpe, J. (2015). Positional information and reaction-diffusion: Two big ideas in developmental biology combine.Development, 142(7), 1203-1211. doi:10.1242/dev.114991nnKimura, Y. T. (2016, May 24). The mathematics of patterns. Retrieved from http://www.theshapeofmath.com/princeton/dynsys nnKimura, Y. T. (2014). The Mathematics of Patterns: The modeling and analysis of reaction-diffusion equations (Thesis, Princeton University). Http://www.pacm.princeton.edu/documents/Kimura.pdf.nnKondo, S., & Asai, R. (1995). A reaction-diffusion wave on the skin of the marine angelfish Pomacanthus. Nature, 376(6543), 765-768. doi:10.1038/376765a0nnKondo, S., & Miura, T. (2010). Reaction-Diffusion Model as a Framework for Understanding Biological Pattern Formation. Science, 329(5999), 1616-1620. doi:10.1126/science.1179047 nnMarcon, L., & Sharpe, J. (2012). Turing patterns in development: What about the horse part? Current Opinion in Genetics & Development, 22(6), 578-584. doi:10.1016/j.gde.2012.11.013nnRaspopovic, J., Marcon, L., Russo, L., & Sharpe, J. (2014). Digit patterning is controlled by a Bmp-Sox9-Wnt Turing network modulated by morphogen gradients. Science, 345(6196), 566-570. doi:10.1126/science.1252960nnStewart, I. (2012). The mathematics of life. Philadelphia, PA: Basic Books. (https://goo.gl/IOagrs)nnTuring, A. M. (1952). The Chemical Basis of Morphogenesis. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, 237(641), 37-72. Retrieved from http://www.dna.caltech.edu/courses/cs191/paperscs191/turing.pdf Less
